Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.38■□□□□ 0.53
Ift88Q61371 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ift88Q61371 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.38■□□□□ 0.53
Ift88Q61371 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift88Q61371 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ift88Q61371 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Ift88Q61371 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.37■□□□□ 0.53
Ift88Q61371 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.37■□□□□ 0.53
Ift88Q61371 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.37■□□□□ 0.53
Ift88Q61371 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift88Q61371 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ift88Q61371 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.36■□□□□ 0.53
Ift88Q61371 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ift88Q61371 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.36■□□□□ 0.53
Ift88Q61371 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift88Q61371 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.35■□□□□ 0.53
Ift88Q61371 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ift88Q61371 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ift88Q61371 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ift88Q61371 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.35■□□□□ 0.53
Ift88Q61371 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ift88Q61371 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.35■□□□□ 0.53
Ift88Q61371 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ift88Q61371 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ift88Q61371 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift88Q61371 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ift88Q61371 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ift88Q61371 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ift88Q61371 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.34■□□□□ 0.53
Ift88Q61371 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ift88Q61371 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ift88Q61371 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ift88Q61371 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ift88Q61371 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ift88Q61371 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ift88Q61371 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms