Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcfc1Q61191 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.89□□□□□ -0.19
Hcfc1Q61191 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.89□□□□□ -0.19
Hcfc1Q61191 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.89□□□□□ -0.19
Hcfc1Q61191 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcfc1Q61191 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.89□□□□□ -0.19
Hcfc1Q61191 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Gm8969-201ENSMUST00000199694 526 ntBASIC13.88□□□□□ -0.19
Hcfc1Q61191 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.88□□□□□ -0.19
Hcfc1Q61191 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc1Q61191 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc1Q61191 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Gm11764-201ENSMUST00000120221 623 ntBASIC13.86□□□□□ -0.19
Hcfc1Q61191 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.86□□□□□ -0.19
Hcfc1Q61191 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.86□□□□□ -0.19
Hcfc1Q61191 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Gm27397-201ENSMUST00000184997 107 ntBASIC13.86□□□□□ -0.19
Hcfc1Q61191 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.86□□□□□ -0.19
Hcfc1Q61191 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.86□□□□□ -0.19
Hcfc1Q61191 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc1Q61191 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc1Q61191 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc1Q61191 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc1Q61191 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc1Q61191 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc1Q61191 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Hcfc1Q61191 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hcfc1Q61191 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.85□□□□□ -0.19
Hcfc1Q61191 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc1Q61191 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hcfc1Q61191 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms