Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atp13a3Q5XF89 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Atp13a3Q5XF89 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.67■□□□□ 0.58
Atp13a3Q5XF89 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atp13a3Q5XF89 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Atp13a3Q5XF89 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Atp13a3Q5XF89 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a3Q5XF89 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a3Q5XF89 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Atp13a3Q5XF89 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atp13a3Q5XF89 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms