Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc85aQ5SP85 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Gm7230-201ENSMUST00000173026 815 ntBASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc85aQ5SP85 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm23935-201ENSMUST00000102303 57 ntBASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm24270-201ENSMUST00000102326 57 ntBASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm24245-201ENSMUST00000157318 57 ntBASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm4535-201ENSMUST00000182274 558 ntBASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm2756-201ENSMUST00000195851 400 ntBASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm10355-201ENSMUST00000097146 517 ntBASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc85aQ5SP85 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Gm14494-201ENSMUST00000118786 435 ntBASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Gm14822-201ENSMUST00000122247 291 ntBASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Gm27397-201ENSMUST00000184997 107 ntBASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc85aQ5SP85 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc85aQ5SP85 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc85aQ5SP85 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc85aQ5SP85 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc85aQ5SP85 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Gm24513-201ENSMUST00000174964 138 ntBASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.25■□□□□ 0.51
Ccdc85aQ5SP85 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms