Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-3Q5R1E6 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Dancr-204ENSMUST00000132389 2347 ntBASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Gm13168-201ENSMUST00000121771 632 ntBASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-3Q5R1E6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-3Q5R1E6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-3Q5R1E6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms