Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm6376-201ENSMUST00000209407 580 ntBASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf43Q5NCP0 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Gm1401-201ENSMUST00000122048 772 ntBASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Gm44454-201ENSMUST00000198541 138 ntBASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf43Q5NCP0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf43Q5NCP0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
Rnf43Q5NCP0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Rnf43Q5NCP0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44357-201ENSMUST00000195897 142 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm19658-201ENSMUST00000196231 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44367-201ENSMUST00000196836 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44350-201ENSMUST00000197197 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44390-201ENSMUST00000197533 144 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44313-201ENSMUST00000198018 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44486-201ENSMUST00000198508 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44314-201ENSMUST00000199263 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44394-201ENSMUST00000199558 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm8969-201ENSMUST00000199694 526 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44484-201ENSMUST00000199873 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44466-201ENSMUST00000200264 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44359-201ENSMUST00000200671 138 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Gm44430-201ENSMUST00000203376 995 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf43Q5NCP0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf43Q5NCP0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms