Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps13aQ5H8C4 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Gm44335-201ENSMUST00000196879 141 ntBASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Gm44297-201ENSMUST00000198304 141 ntBASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Gm44346-201ENSMUST00000198851 141 ntBASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps13aQ5H8C4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm27646-201ENSMUST00000183989 110 ntBASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm5312-201ENSMUST00000203728 547 ntBASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm2423-201ENSMUST00000074863 733 ntBASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.38■□□□□ 0.21
Vps13aQ5H8C4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Gm4459-201ENSMUST00000118750 468 ntBASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Vps13aQ5H8C4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps13aQ5H8C4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms