Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Gm15565-201ENSMUST00000118890 427 ntBASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Gm45058-201ENSMUST00000205810 766 ntBASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf20Q5DTM8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Mir1668-201ENSMUST00000184114 107 ntBASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf20Q5DTM8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf20Q5DTM8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms