Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Urb1Q571H0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.23■□□□□ 0.03
Urb1Q571H0 Gm6736-201ENSMUST00000166583 948 ntBASIC15.23■□□□□ 0.03
Urb1Q571H0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Urb1Q571H0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Urb1Q571H0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Gm2756-201ENSMUST00000195851 400 ntBASIC15.22■□□□□ 0.03
Urb1Q571H0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Urb1Q571H0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Urb1Q571H0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Urb1Q571H0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Urb1Q571H0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Urb1Q571H0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Gm8000-201ENSMUST00000188378 592 ntBASIC15.21■□□□□ 0.03
Urb1Q571H0 Psmb5-202ENSMUST00000227257 622 ntBASIC15.21■□□□□ 0.03
Urb1Q571H0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Urb1Q571H0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Urb1Q571H0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Urb1Q571H0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.21■□□□□ 0.02
Urb1Q571H0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Urb1Q571H0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.2■□□□□ 0.02
Urb1Q571H0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Urb1Q571H0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.2■□□□□ 0.02
Urb1Q571H0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Urb1Q571H0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.2■□□□□ 0.02
Urb1Q571H0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.2■□□□□ 0.02
Urb1Q571H0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.2■□□□□ 0.02
Urb1Q571H0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.2■□□□□ 0.02
Urb1Q571H0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.2■□□□□ 0.02
Urb1Q571H0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.2■□□□□ 0.02
Urb1Q571H0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Urb1Q571H0 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.19■□□□□ 0.02
Urb1Q571H0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.19■□□□□ 0.02
Urb1Q571H0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Urb1Q571H0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Urb1Q571H0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Urb1Q571H0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.19■□□□□ 0.02
Urb1Q571H0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Urb1Q571H0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Urb1Q571H0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Urb1Q571H0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Urb1Q571H0 Rarb-207ENSMUST00000225921 2756 ntBASIC15.19■□□□□ 0.02
Urb1Q571H0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Urb1Q571H0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms