Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Shank3Q4ACU6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.62■□□□□ 0.89
Shank3Q4ACU6 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.62■□□□□ 0.89
Shank3Q4ACU6 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Shank3Q4ACU6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.61■□□□□ 0.89
Shank3Q4ACU6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Gm11764-201ENSMUST00000120221 623 ntBASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Shank3Q4ACU6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Shank3Q4ACU6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shank3Q4ACU6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Gm13597-201ENSMUST00000121239 375 ntBASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Mir6404-201ENSMUST00000183699 94 ntBASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shank3Q4ACU6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Gm26308-201ENSMUST00000157768 69 ntBASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank3Q4ACU6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Mir8117-201ENSMUST00000184773 107 ntBASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Shank3Q4ACU6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms