Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef40Q3UPH7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Gm14494-201ENSMUST00000118786 435 ntBASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Gm12260-201ENSMUST00000122447 411 ntBASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 AC225888.1-201ENSMUST00000227184 728 ntBASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Arhgef40Q3UPH7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC24.33■■□□□ 1.48
Arhgef40Q3UPH7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Arhgef40Q3UPH7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Arhgef40Q3UPH7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 AC084391.1-201ENSMUST00000200651 141 ntBASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Arhgef40Q3UPH7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Gm24513-201ENSMUST00000174964 138 ntBASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Gm43935-201ENSMUST00000203569 1050 ntBASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Gm9172-201ENSMUST00000212092 954 ntBASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 AC154757.1-201ENSMUST00000228289 336 ntBASIC24.3■■□□□ 1.48
Arhgef40Q3UPH7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Gm5837-201ENSMUST00000191844 1369 ntBASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Arhgef40Q3UPH7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Mir6404-201ENSMUST00000183699 94 ntBASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Gm10175-201ENSMUST00000086013 645 ntBASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Arhgef40Q3UPH7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Gm27397-201ENSMUST00000184997 107 ntBASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC24.27■■□□□ 1.48
Arhgef40Q3UPH7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms