Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdk1Q3UH53 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Gm11025-201ENSMUST00000140773 466 ntBASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sdk1Q3UH53 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Gm44872-201ENSMUST00000207864 420 ntBASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.02□□□□□ -0.17
Sdk1Q3UH53 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdk1Q3UH53 Gm4913-201ENSMUST00000117075 1290 ntBASIC14□□□□□ -0.17
Sdk1Q3UH53 Gm12497-201ENSMUST00000138778 237 ntBASIC14□□□□□ -0.17
Sdk1Q3UH53 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Gm37584-201ENSMUST00000193595 1290 ntBASIC14□□□□□ -0.17
Sdk1Q3UH53 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Gm35558-201ENSMUST00000222675 2219 ntBASIC14□□□□□ -0.17
Sdk1Q3UH53 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14□□□□□ -0.17
Sdk1Q3UH53 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Sdk1Q3UH53 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdk1Q3UH53 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14□□□□□ -0.17
Sdk1Q3UH53 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdk1Q3UH53 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms