Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GabpaQ00422 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GabpaQ00422 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.82■□□□□ 0.6
GabpaQ00422 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Mir8098-201ENSMUST00000184011 137 ntBASIC18.82■□□□□ 0.6
GabpaQ00422 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.82■□□□□ 0.6
GabpaQ00422 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.82■□□□□ 0.6
GabpaQ00422 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GabpaQ00422 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GabpaQ00422 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
GabpaQ00422 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
GabpaQ00422 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.81■□□□□ 0.6
GabpaQ00422 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.81■□□□□ 0.6
GabpaQ00422 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.81■□□□□ 0.6
GabpaQ00422 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GabpaQ00422 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GabpaQ00422 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.8■□□□□ 0.6
GabpaQ00422 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GabpaQ00422 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.8■□□□□ 0.6
GabpaQ00422 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.8■□□□□ 0.6
GabpaQ00422 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.8■□□□□ 0.6
GabpaQ00422 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.8■□□□□ 0.6
GabpaQ00422 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
GabpaQ00422 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GabpaQ00422 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GabpaQ00422 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Gm12644-201ENSMUST00000119935 606 ntBASIC18.79■□□□□ 0.6
GabpaQ00422 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.79■□□□□ 0.6
GabpaQ00422 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
GabpaQ00422 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.79■□□□□ 0.6
GabpaQ00422 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GabpaQ00422 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
GabpaQ00422 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GabpaQ00422 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
GabpaQ00422 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GabpaQ00422 Gm44454-201ENSMUST00000198541 138 ntBASIC18.78■□□□□ 0.6
GabpaQ00422 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.78■□□□□ 0.6
GabpaQ00422 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GabpaQ00422 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GabpaQ00422 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GabpaQ00422 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GabpaQ00422 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.77■□□□□ 0.6
GabpaQ00422 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.77■□□□□ 0.6
GabpaQ00422 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.77■□□□□ 0.6
GabpaQ00422 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GabpaQ00422 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GabpaQ00422 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms