Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Gm23935-201ENSMUST00000102303 57 ntBASIC20.71■□□□□ 0.91
Smarcc1P97496 Gm24270-201ENSMUST00000102326 57 ntBASIC20.71■□□□□ 0.91
Smarcc1P97496 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Gm24245-201ENSMUST00000157318 57 ntBASIC20.71■□□□□ 0.91
Smarcc1P97496 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.71■□□□□ 0.91
Smarcc1P97496 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 AV026068-213ENSMUST00000223675 1171 ntBASIC20.71■□□□□ 0.91
Smarcc1P97496 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.71■□□□□ 0.91
Smarcc1P97496 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcc1P97496 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Smarcc1P97496 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Smarcc1P97496 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.7■□□□□ 0.9
Smarcc1P97496 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Smarcc1P97496 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.7■□□□□ 0.9
Smarcc1P97496 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Smarcc1P97496 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcc1P97496 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Smarcc1P97496 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.69■□□□□ 0.9
Smarcc1P97496 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.69■□□□□ 0.9
Smarcc1P97496 Gm6550-201ENSMUST00000187574 993 ntBASIC20.69■□□□□ 0.9
Smarcc1P97496 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.69■□□□□ 0.9
Smarcc1P97496 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcc1P97496 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.68■□□□□ 0.9
Smarcc1P97496 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.68■□□□□ 0.9
Smarcc1P97496 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.68■□□□□ 0.9
Smarcc1P97496 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Gm4995-201ENSMUST00000117247 432 ntBASIC20.68■□□□□ 0.9
Smarcc1P97496 Gm14140-201ENSMUST00000119999 995 ntBASIC20.68■□□□□ 0.9
Smarcc1P97496 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.68■□□□□ 0.9
Smarcc1P97496 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.68■□□□□ 0.9
Smarcc1P97496 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.68■□□□□ 0.9
Smarcc1P97496 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.68■□□□□ 0.9
Smarcc1P97496 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.68■□□□□ 0.9
Smarcc1P97496 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcc1P97496 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Smarcc1P97496 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcc1P97496 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.67■□□□□ 0.9
Smarcc1P97496 Gm24513-201ENSMUST00000174964 138 ntBASIC20.67■□□□□ 0.9
Smarcc1P97496 Gm27397-201ENSMUST00000184997 107 ntBASIC20.67■□□□□ 0.9
Smarcc1P97496 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.67■□□□□ 0.9
Smarcc1P97496 Gm6089-201ENSMUST00000197666 938 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms