Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
PrkdcP97313 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
PrkdcP97313 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
PrkdcP97313 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.33□□□□□ -0.6
PrkdcP97313 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.33□□□□□ -0.6
PrkdcP97313 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC11.33□□□□□ -0.6
PrkdcP97313 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
PrkdcP97313 Gm45141-201ENSMUST00000206502 1888 ntBASIC11.33□□□□□ -0.6
PrkdcP97313 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC11.33□□□□□ -0.6
PrkdcP97313 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
PrkdcP97313 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
PrkdcP97313 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PrkdcP97313 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.33□□□□□ -0.6
PrkdcP97313 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.32□□□□□ -0.6
PrkdcP97313 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.32□□□□□ -0.6
PrkdcP97313 Mir1895-201ENSMUST00000122615 79 ntBASIC11.32□□□□□ -0.6
PrkdcP97313 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.32□□□□□ -0.6
PrkdcP97313 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.32□□□□□ -0.6
PrkdcP97313 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.32□□□□□ -0.6
PrkdcP97313 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
PrkdcP97313 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Gm6912-201ENSMUST00000117218 544 ntBASIC11.32□□□□□ -0.6
PrkdcP97313 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PrkdcP97313 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.32□□□□□ -0.6
PrkdcP97313 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC11.32□□□□□ -0.6
PrkdcP97313 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.32□□□□□ -0.6
PrkdcP97313 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PrkdcP97313 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.31□□□□□ -0.6
PrkdcP97313 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC11.31□□□□□ -0.6
PrkdcP97313 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.31□□□□□ -0.6
PrkdcP97313 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.31□□□□□ -0.6
PrkdcP97313 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.31□□□□□ -0.6
PrkdcP97313 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.31□□□□□ -0.6
PrkdcP97313 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.31□□□□□ -0.6
PrkdcP97313 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.31□□□□□ -0.6
PrkdcP97313 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PrkdcP97313 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PrkdcP97313 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PrkdcP97313 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PrkdcP97313 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.31□□□□□ -0.6
PrkdcP97313 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PrkdcP97313 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PrkdcP97313 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC11.3□□□□□ -0.6
PrkdcP97313 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.3□□□□□ -0.6
PrkdcP97313 Gm17271-201ENSMUST00000165535 355 ntBASIC11.3□□□□□ -0.6
PrkdcP97313 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.3□□□□□ -0.6
PrkdcP97313 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.3□□□□□ -0.6
PrkdcP97313 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PrkdcP97313 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.3□□□□□ -0.6
PrkdcP97313 Gm7653-201ENSMUST00000214567 508 ntBASIC11.3□□□□□ -0.6
PrkdcP97313 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms