Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lhx1P63006 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lhx1P63006 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.29■□□□□ 0.2
Lhx1P63006 Mir3081-201ENSMUST00000175305 84 ntBASIC16.29■□□□□ 0.2
Lhx1P63006 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.29■□□□□ 0.2
Lhx1P63006 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lhx1P63006 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.29■□□□□ 0.2
Lhx1P63006 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.29■□□□□ 0.2
Lhx1P63006 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx1P63006 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lhx1P63006 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Lhx1P63006 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Gm10052-201ENSMUST00000168019 960 ntBASIC16.28■□□□□ 0.2
Lhx1P63006 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.28■□□□□ 0.2
Lhx1P63006 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lhx1P63006 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Lhx1P63006 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.28■□□□□ 0.2
Lhx1P63006 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Gm7729-201ENSMUST00000050143 801 ntBASIC16.28■□□□□ 0.2
Lhx1P63006 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lhx1P63006 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx1P63006 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Lhx1P63006 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.27■□□□□ 0.2
Lhx1P63006 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Olfr129-201ENSMUST00000122318 993 ntBASIC16.27■□□□□ 0.2
Lhx1P63006 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.27■□□□□ 0.2
Lhx1P63006 Gm18669-201ENSMUST00000216049 778 ntBASIC16.27■□□□□ 0.2
Lhx1P63006 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lhx1P63006 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.27■□□□□ 0.2
Lhx1P63006 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx1P63006 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx1P63006 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lhx1P63006 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx1P63006 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx1P63006 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lhx1P63006 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lhx1P63006 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.26■□□□□ 0.19
Lhx1P63006 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Lhx1P63006 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lhx1P63006 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.26■□□□□ 0.19
Lhx1P63006 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx1P63006 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms