Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.9□□□□□ -0.18
Lsm5P62322 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.9□□□□□ -0.18
Lsm5P62322 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.9□□□□□ -0.18
Lsm5P62322 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm5P62322 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.9□□□□□ -0.19
Lsm5P62322 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Mir2861-201ENSMUST00000175539 82 ntBASIC13.89□□□□□ -0.19
Lsm5P62322 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lsm5P62322 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lsm5P62322 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Zfp783-201ENSMUST00000095946 670 ntBASIC13.89□□□□□ -0.19
Lsm5P62322 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lsm5P62322 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm5P62322 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm5P62322 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Lsm5P62322 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.88□□□□□ -0.19
Lsm5P62322 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lsm5P62322 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lsm5P62322 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm5P62322 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Lsm5P62322 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Lsm5P62322 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.87□□□□□ -0.19
Lsm5P62322 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.87□□□□□ -0.19
Lsm5P62322 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lsm5P62322 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.87□□□□□ -0.19
Lsm5P62322 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lsm5P62322 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Lsm5P62322 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Lsm5P62322 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lsm5P62322 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm5P62322 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm5P62322 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Lsm5P62322 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm5P62322 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm5P62322 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm5P62322 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm5P62322 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms