Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh5P55284 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh5P55284 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh5P55284 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh5P55284 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh5P55284 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdh5P55284 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh5P55284 Gm43799-201ENSMUST00000201845 579 ntBASIC16.18■□□□□ 0.18
Cdh5P55284 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.18■□□□□ 0.18
Cdh5P55284 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh5P55284 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh5P55284 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh5P55284 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh5P55284 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdh5P55284 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh5P55284 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh5P55284 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cdh5P55284 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh5P55284 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh5P55284 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh5P55284 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Gm13401-201ENSMUST00000117074 291 ntBASIC16.17■□□□□ 0.18
Cdh5P55284 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdh5P55284 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.17■□□□□ 0.18
Cdh5P55284 Gm3375-201ENSMUST00000203929 796 ntBASIC16.17■□□□□ 0.18
Cdh5P55284 Gm29791-202ENSMUST00000207888 369 ntBASIC16.17■□□□□ 0.18
Cdh5P55284 Odf3b-204ENSMUST00000227834 930 ntBASIC16.17■□□□□ 0.18
Cdh5P55284 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh5P55284 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdh5P55284 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh5P55284 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.17■□□□□ 0.18
Cdh5P55284 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh5P55284 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdh5P55284 Gm10418-201ENSMUST00000100943 576 ntBASIC16.16■□□□□ 0.18
Cdh5P55284 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.16■□□□□ 0.18
Cdh5P55284 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.16■□□□□ 0.18
Cdh5P55284 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh5P55284 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.15■□□□□ 0.18
Cdh5P55284 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdh5P55284 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cdh5P55284 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh5P55284 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh5P55284 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms