Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pdx1P52946 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pdx1P52946 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pdx1P52946 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Gm37722-201ENSMUST00000193757 208 ntBASIC16.41■□□□□ 0.22
Pdx1P52946 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pdx1P52946 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.41■□□□□ 0.22
Pdx1P52946 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pdx1P52946 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pdx1P52946 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Pdx1P52946 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.4■□□□□ 0.22
Pdx1P52946 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pdx1P52946 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pdx1P52946 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pdx1P52946 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.4■□□□□ 0.22
Pdx1P52946 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Gm18421-201ENSMUST00000204122 625 ntBASIC16.4■□□□□ 0.22
Pdx1P52946 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pdx1P52946 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdx1P52946 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pdx1P52946 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pdx1P52946 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pdx1P52946 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pdx1P52946 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pdx1P52946 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.39■□□□□ 0.21
Pdx1P52946 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdx1P52946 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pdx1P52946 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.38■□□□□ 0.21
Pdx1P52946 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pdx1P52946 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Gm11355-201ENSMUST00000121120 306 ntBASIC16.38■□□□□ 0.21
Pdx1P52946 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.38■□□□□ 0.21
Pdx1P52946 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.38■□□□□ 0.21
Pdx1P52946 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pdx1P52946 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Pdx1P52946 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdx1P52946 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pdx1P52946 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.37■□□□□ 0.21
Pdx1P52946 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.37■□□□□ 0.21
Pdx1P52946 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms