Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Gm25406-201ENSMUST00000157599 105 ntBASIC17.67■□□□□ 0.42
HttP42859 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.67■□□□□ 0.42
HttP42859 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HttP42859 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HttP42859 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HttP42859 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HttP42859 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.66■□□□□ 0.42
HttP42859 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HttP42859 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.66■□□□□ 0.42
HttP42859 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.66■□□□□ 0.42
HttP42859 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
HttP42859 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HttP42859 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HttP42859 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HttP42859 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HttP42859 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.65■□□□□ 0.42
HttP42859 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HttP42859 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.65■□□□□ 0.42
HttP42859 Mir1895-201ENSMUST00000122615 79 ntBASIC17.65■□□□□ 0.42
HttP42859 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HttP42859 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HttP42859 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HttP42859 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.65■□□□□ 0.42
HttP42859 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HttP42859 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HttP42859 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HttP42859 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Mir6990-201ENSMUST00000183724 91 ntBASIC17.64■□□□□ 0.41
HttP42859 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HttP42859 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.64■□□□□ 0.41
HttP42859 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.64■□□□□ 0.41
HttP42859 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.64■□□□□ 0.41
HttP42859 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HttP42859 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
HttP42859 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HttP42859 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.63■□□□□ 0.41
HttP42859 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.63■□□□□ 0.41
HttP42859 Gm25948-201ENSMUST00000175334 112 ntBASIC17.63■□□□□ 0.41
HttP42859 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.63■□□□□ 0.41
HttP42859 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.63■□□□□ 0.41
HttP42859 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HttP42859 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.63■□□□□ 0.41
HttP42859 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.63■□□□□ 0.41
HttP42859 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HttP42859 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.62■□□□□ 0.41
HttP42859 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.62■□□□□ 0.41
HttP42859 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms