Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a11P31650 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a11P31650 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a11P31650 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Slc6a11P31650 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Slc6a11P31650 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Slc6a11P31650 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Gm37292-201ENSMUST00000192062 758 ntBASIC15.76■□□□□ 0.11
Slc6a11P31650 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Slc6a11P31650 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.76■□□□□ 0.11
Slc6a11P31650 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Slc6a11P31650 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Slc6a11P31650 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a11P31650 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Slc6a11P31650 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.75■□□□□ 0.11
Slc6a11P31650 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Slc6a11P31650 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.75■□□□□ 0.11
Slc6a11P31650 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Slc6a11P31650 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Gm24841-201ENSMUST00000158676 357 ntBASIC15.75■□□□□ 0.11
Slc6a11P31650 Gm10517-202ENSMUST00000192970 758 ntBASIC15.75■□□□□ 0.11
Slc6a11P31650 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Slc6a11P31650 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Slc6a11P31650 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc6a11P31650 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.74■□□□□ 0.11
Slc6a11P31650 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.74■□□□□ 0.11
Slc6a11P31650 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Slc6a11P31650 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Slc6a11P31650 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.74■□□□□ 0.11
Slc6a11P31650 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc6a11P31650 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Slc6a11P31650 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.73■□□□□ 0.11
Slc6a11P31650 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Gm12382-201ENSMUST00000122005 922 ntBASIC15.73■□□□□ 0.11
Slc6a11P31650 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.73■□□□□ 0.11
Slc6a11P31650 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.73■□□□□ 0.11
Slc6a11P31650 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.73■□□□□ 0.11
Slc6a11P31650 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
Slc6a11P31650 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Slc6a11P31650 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Slc6a11P31650 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms