Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.32□□□□□ -0.12
Slc6a1P31648 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a1P31648 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.32□□□□□ -0.12
Slc6a1P31648 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Slc6a1P31648 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Gm20049-201ENSMUST00000219950 730 ntBASIC14.31□□□□□ -0.12
Slc6a1P31648 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Asic1-205ENSMUST00000228185 1818 ntBASIC14.31□□□□□ -0.12
Slc6a1P31648 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Slc6a1P31648 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Slc6a1P31648 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.3□□□□□ -0.12
Slc6a1P31648 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Slc6a1P31648 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.3□□□□□ -0.12
Slc6a1P31648 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Slc6a1P31648 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Slc6a1P31648 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Slc6a1P31648 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.29□□□□□ -0.12
Slc6a1P31648 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Slc6a1P31648 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.29□□□□□ -0.12
Slc6a1P31648 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Slc6a1P31648 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc6a1P31648 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Slc6a1P31648 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Slc6a1P31648 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms