Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.03■□□□□ 0.64
Vcam1P29533 Gm7506-201ENSMUST00000207758 815 ntBASIC19.03■□□□□ 0.64
Vcam1P29533 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.03■□□□□ 0.64
Vcam1P29533 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.03■□□□□ 0.64
Vcam1P29533 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Vcam1P29533 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vcam1P29533 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Vcam1P29533 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Vcam1P29533 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.02■□□□□ 0.64
Vcam1P29533 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.02■□□□□ 0.64
Vcam1P29533 Gm2651-201ENSMUST00000203560 838 ntBASIC19.02■□□□□ 0.64
Vcam1P29533 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Vcam1P29533 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vcam1P29533 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vcam1P29533 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.02■□□□□ 0.63
Vcam1P29533 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Vcam1P29533 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.01■□□□□ 0.63
Vcam1P29533 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Vcam1P29533 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Vcam1P29533 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Vcam1P29533 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.01■□□□□ 0.63
Vcam1P29533 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcam1P29533 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19■□□□□ 0.63
Vcam1P29533 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vcam1P29533 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Vcam1P29533 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcam1P29533 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vcam1P29533 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vcam1P29533 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.99■□□□□ 0.63
Vcam1P29533 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcam1P29533 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.98■□□□□ 0.63
Vcam1P29533 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vcam1P29533 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Mir5131-201ENSMUST00000175426 93 ntBASIC18.98■□□□□ 0.63
Vcam1P29533 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Vcam1P29533 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Vcam1P29533 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.98■□□□□ 0.63
Vcam1P29533 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.98■□□□□ 0.63
Vcam1P29533 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Vcam1P29533 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vcam1P29533 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcam1P29533 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms