Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim1P0C8K7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Mir6538-201ENSMUST00000183713 110 ntBASIC11.48□□□□□ -0.57
Smim1P0C8K7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smim1P0C8K7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim1P0C8K7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.47□□□□□ -0.57
Smim1P0C8K7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Gm12251-201ENSMUST00000117893 792 ntBASIC11.47□□□□□ -0.57
Smim1P0C8K7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.47□□□□□ -0.57
Smim1P0C8K7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.47□□□□□ -0.57
Smim1P0C8K7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim1P0C8K7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.46□□□□□ -0.57
Smim1P0C8K7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim1P0C8K7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.46□□□□□ -0.58
Smim1P0C8K7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim1P0C8K7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.45□□□□□ -0.58
Smim1P0C8K7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms