Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Polr2aP08775 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2aP08775 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2aP08775 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2aP08775 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Polr2aP08775 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.85■□□□□ 0.61
Polr2aP08775 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.85■□□□□ 0.61
Polr2aP08775 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Polr2aP08775 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.85■□□□□ 0.61
Polr2aP08775 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2aP08775 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2aP08775 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2aP08775 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.85■□□□□ 0.61
Polr2aP08775 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2aP08775 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2aP08775 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2aP08775 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.84■□□□□ 0.61
Polr2aP08775 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.84■□□□□ 0.61
Polr2aP08775 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2aP08775 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Polr2aP08775 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2aP08775 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2aP08775 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.84■□□□□ 0.61
Polr2aP08775 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.84■□□□□ 0.61
Polr2aP08775 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2aP08775 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2aP08775 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 Gm44872-201ENSMUST00000207864 420 ntBASIC18.83■□□□□ 0.61
Polr2aP08775 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2aP08775 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2aP08775 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2aP08775 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2aP08775 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2aP08775 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2aP08775 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2aP08775 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.82■□□□□ 0.6
Polr2aP08775 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Polr2aP08775 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2aP08775 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2aP08775 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.82■□□□□ 0.6
Polr2aP08775 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2aP08775 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2aP08775 Gm5312-201ENSMUST00000203728 547 ntBASIC18.82■□□□□ 0.6
Polr2aP08775 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.82■□□□□ 0.6
Polr2aP08775 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2aP08775 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2aP08775 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.81■□□□□ 0.6
Polr2aP08775 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.81■□□□□ 0.6
Polr2aP08775 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.81■□□□□ 0.6
Polr2aP08775 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.81■□□□□ 0.6
Polr2aP08775 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.81■□□□□ 0.6
Polr2aP08775 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.81■□□□□ 0.6
Polr2aP08775 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.81■□□□□ 0.6
Polr2aP08775 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2aP08775 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Polr2aP08775 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Gm27300-201ENSMUST00000184085 97 ntBASIC18.8■□□□□ 0.6
Polr2aP08775 Gm27335-201ENSMUST00000184758 97 ntBASIC18.8■□□□□ 0.6
Polr2aP08775 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Gm44335-201ENSMUST00000196879 141 ntBASIC18.8■□□□□ 0.6
Polr2aP08775 Gm44297-201ENSMUST00000198304 141 ntBASIC18.8■□□□□ 0.6
Polr2aP08775 Gm44346-201ENSMUST00000198851 141 ntBASIC18.8■□□□□ 0.6
Polr2aP08775 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Polr2aP08775 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Polr2aP08775 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2aP08775 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Polr2aP08775 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Polr2aP08775 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms