Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.61□□□□□ -0.07
P04224 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.61□□□□□ -0.07
P04224 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.61□□□□□ -0.07
P04224 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.61□□□□□ -0.07
P04224 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
P04224 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
P04224 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04224 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.6□□□□□ -0.07
P04224 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04224 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
P04224 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.6□□□□□ -0.07
P04224 Gm6211-202ENSMUST00000167849 925 ntBASIC14.6□□□□□ -0.07
P04224 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.6□□□□□ -0.07
P04224 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
P04224 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
P04224 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
P04224 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04224 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04224 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
P04224 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.6□□□□□ -0.07
P04224 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
P04224 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04224 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04224 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P04224 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
P04224 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Gm10418-201ENSMUST00000100943 576 ntBASIC14.59□□□□□ -0.07
P04224 Gm7290-201ENSMUST00000104990 617 ntBASIC14.59□□□□□ -0.07
P04224 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
P04224 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Gm12918-201ENSMUST00000120234 636 ntBASIC14.59□□□□□ -0.07
P04224 Gm15710-201ENSMUST00000121821 636 ntBASIC14.59□□□□□ -0.07
P04224 Gm5075-201ENSMUST00000196916 622 ntBASIC14.59□□□□□ -0.07
P04224 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.59□□□□□ -0.07
P04224 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.59□□□□□ -0.07
P04224 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.59□□□□□ -0.07
P04224 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.59□□□□□ -0.07
P04224 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.59□□□□□ -0.07
P04224 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P04224 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
P04224 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
P04224 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
P04224 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P04224 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
P04224 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.57□□□□□ -0.08
P04224 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.57□□□□□ -0.08
P04224 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04224 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
P04224 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms