Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxa3P02831 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxa3P02831 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxa3P02831 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.9□□□□□ -0.18
Hoxa3P02831 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxa3P02831 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxa3P02831 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.9□□□□□ -0.19
Hoxa3P02831 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxa3P02831 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.9□□□□□ -0.19
Hoxa3P02831 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxa3P02831 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxa3P02831 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxa3P02831 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxa3P02831 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxa3P02831 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxa3P02831 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxa3P02831 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hoxa3P02831 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Mir770-201ENSMUST00000103252 94 ntBASIC13.88□□□□□ -0.19
Hoxa3P02831 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.88□□□□□ -0.19
Hoxa3P02831 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Gm9103-201ENSMUST00000119371 405 ntBASIC13.88□□□□□ -0.19
Hoxa3P02831 Gm11950-201ENSMUST00000121615 838 ntBASIC13.88□□□□□ -0.19
Hoxa3P02831 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxa3P02831 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.88□□□□□ -0.19
Hoxa3P02831 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxa3P02831 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hoxa3P02831 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hoxa3P02831 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms