Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Best1O88870 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.92■□□□□ 0.14
Best1O88870 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.92■□□□□ 0.14
Best1O88870 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Best1O88870 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.92■□□□□ 0.14
Best1O88870 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.92■□□□□ 0.14
Best1O88870 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Best1O88870 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Best1O88870 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Best1O88870 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Best1O88870 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Best1O88870 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Best1O88870 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Best1O88870 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Best1O88870 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Best1O88870 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.91■□□□□ 0.14
Best1O88870 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.91■□□□□ 0.14
Best1O88870 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.91■□□□□ 0.14
Best1O88870 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.91■□□□□ 0.14
Best1O88870 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.91■□□□□ 0.14
Best1O88870 Gm44454-201ENSMUST00000198541 138 ntBASIC15.91■□□□□ 0.14
Best1O88870 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.91■□□□□ 0.14
Best1O88870 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.91■□□□□ 0.14
Best1O88870 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Best1O88870 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Best1O88870 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Best1O88870 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.91■□□□□ 0.14
Best1O88870 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Best1O88870 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Best1O88870 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Best1O88870 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Best1O88870 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.9■□□□□ 0.14
Best1O88870 Gm34391-201ENSMUST00000203706 907 ntBASIC15.9■□□□□ 0.14
Best1O88870 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Best1O88870 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.9■□□□□ 0.14
Best1O88870 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Best1O88870 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Best1O88870 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.89■□□□□ 0.14
Best1O88870 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Best1O88870 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.89■□□□□ 0.13
Best1O88870 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.89■□□□□ 0.13
Best1O88870 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Best1O88870 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms