Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vti1bO88384 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vti1bO88384 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vti1bO88384 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vti1bO88384 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vti1bO88384 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vti1bO88384 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vti1bO88384 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.82■□□□□ 0.12
Vti1bO88384 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.82■□□□□ 0.12
Vti1bO88384 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vti1bO88384 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Vti1bO88384 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.82■□□□□ 0.12
Vti1bO88384 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vti1bO88384 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.82■□□□□ 0.12
Vti1bO88384 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vti1bO88384 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.81■□□□□ 0.12
Vti1bO88384 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.81■□□□□ 0.12
Vti1bO88384 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.81■□□□□ 0.12
Vti1bO88384 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.81■□□□□ 0.12
Vti1bO88384 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.81■□□□□ 0.12
Vti1bO88384 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.81■□□□□ 0.12
Vti1bO88384 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.81■□□□□ 0.12
Vti1bO88384 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Vti1bO88384 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.81■□□□□ 0.12
Vti1bO88384 Timm23-208ENSMUST00000226683 750 ntBASIC15.81■□□□□ 0.12
Vti1bO88384 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.81■□□□□ 0.12
Vti1bO88384 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vti1bO88384 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vti1bO88384 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.8■□□□□ 0.12
Vti1bO88384 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.8■□□□□ 0.12
Vti1bO88384 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.8■□□□□ 0.12
Vti1bO88384 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.8■□□□□ 0.12
Vti1bO88384 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.8■□□□□ 0.12
Vti1bO88384 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Mir5122-201ENSMUST00000175004 89 ntBASIC15.8■□□□□ 0.12
Vti1bO88384 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.8■□□□□ 0.12
Vti1bO88384 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.8■□□□□ 0.12
Vti1bO88384 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vti1bO88384 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.8■□□□□ 0.12
Vti1bO88384 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vti1bO88384 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1bO88384 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Vti1bO88384 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1bO88384 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1bO88384 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1bO88384 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Vti1bO88384 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1bO88384 Gm12085-201ENSMUST00000119263 940 ntBASIC15.79■□□□□ 0.12
Vti1bO88384 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.79■□□□□ 0.12
Vti1bO88384 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.79■□□□□ 0.12
Vti1bO88384 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vti1bO88384 Odf3b-204ENSMUST00000227834 930 ntBASIC15.79■□□□□ 0.12
Vti1bO88384 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1bO88384 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vti1bO88384 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vti1bO88384 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms