Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc3O88196 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Ttc3O88196 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc3O88196 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ttc3O88196 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc3O88196 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc3O88196 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc3O88196 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc3O88196 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ttc3O88196 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ttc3O88196 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc3O88196 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc3O88196 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc3O88196 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc3O88196 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc3O88196 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Ttc3O88196 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.33■□□□□ 0.36
Ttc3O88196 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc3O88196 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ttc3O88196 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ttc3O88196 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.32■□□□□ 0.36
Ttc3O88196 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.32■□□□□ 0.36
Ttc3O88196 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ttc3O88196 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ttc3O88196 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ttc3O88196 Gm36967-201ENSMUST00000193814 266 ntBASIC17.31■□□□□ 0.36
Ttc3O88196 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ttc3O88196 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
Ttc3O88196 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.31■□□□□ 0.36
Ttc3O88196 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.31■□□□□ 0.36
Ttc3O88196 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Gm27525-201ENSMUST00000184465 107 ntBASIC17.31■□□□□ 0.36
Ttc3O88196 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ttc3O88196 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ttc3O88196 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ttc3O88196 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.31■□□□□ 0.36
Ttc3O88196 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Gm43514-201ENSMUST00000198852 424 ntBASIC17.3■□□□□ 0.36
Ttc3O88196 Gm18195-201ENSMUST00000207604 706 ntBASIC17.3■□□□□ 0.36
Ttc3O88196 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.3■□□□□ 0.36
Ttc3O88196 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ttc3O88196 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.3■□□□□ 0.36
Ttc3O88196 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ttc3O88196 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Ttc3O88196 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.29■□□□□ 0.36
Ttc3O88196 Gm6376-201ENSMUST00000209407 580 ntBASIC17.29■□□□□ 0.36
Ttc3O88196 Gm6296-201ENSMUST00000222599 943 ntBASIC17.29■□□□□ 0.36
Ttc3O88196 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.29■□□□□ 0.36
Ttc3O88196 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.29■□□□□ 0.36
Ttc3O88196 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ttc3O88196 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.28■□□□□ 0.36
Ttc3O88196 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.28■□□□□ 0.36
Ttc3O88196 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.28■□□□□ 0.36
Ttc3O88196 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.28■□□□□ 0.36
Ttc3O88196 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.28■□□□□ 0.36
Ttc3O88196 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.28■□□□□ 0.36
Ttc3O88196 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms