Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smarce1O54941 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smarce1O54941 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smarce1O54941 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarce1O54941 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Smarce1O54941 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smarce1O54941 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smarce1O54941 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.71■□□□□ 0.75
Smarce1O54941 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Smarce1O54941 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Mir1199-201ENSMUST00000117015 119 ntBASIC19.71■□□□□ 0.75
Smarce1O54941 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smarce1O54941 Gm7791-201ENSMUST00000219066 539 ntBASIC19.71■□□□□ 0.75
Smarce1O54941 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.71■□□□□ 0.75
Smarce1O54941 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.71■□□□□ 0.75
Smarce1O54941 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.71■□□□□ 0.75
Smarce1O54941 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.71■□□□□ 0.75
Smarce1O54941 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarce1O54941 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smarce1O54941 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.7■□□□□ 0.74
Smarce1O54941 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarce1O54941 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smarce1O54941 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.7■□□□□ 0.74
Smarce1O54941 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarce1O54941 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smarce1O54941 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Smarce1O54941 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarce1O54941 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.69■□□□□ 0.74
Smarce1O54941 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Smarce1O54941 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarce1O54941 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smarce1O54941 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Smarce1O54941 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smarce1O54941 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Smarce1O54941 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.68■□□□□ 0.74
Smarce1O54941 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.68■□□□□ 0.74
Smarce1O54941 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarce1O54941 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.67■□□□□ 0.74
Smarce1O54941 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smarce1O54941 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms