Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Gm44450-201ENSMUST00000199528 114 ntBASIC16.83■□□□□ 0.28
Limk2O54785 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Gm18669-201ENSMUST00000216049 778 ntBASIC16.83■□□□□ 0.28
Limk2O54785 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Limk2O54785 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.83■□□□□ 0.28
Limk2O54785 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Limk2O54785 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.82■□□□□ 0.28
Limk2O54785 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Limk2O54785 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Limk2O54785 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Limk2O54785 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.81■□□□□ 0.28
Limk2O54785 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.81■□□□□ 0.28
Limk2O54785 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Limk2O54785 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Limk2O54785 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Limk2O54785 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.81■□□□□ 0.28
Limk2O54785 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.81■□□□□ 0.28
Limk2O54785 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Limk2O54785 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
Limk2O54785 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Limk2O54785 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Limk2O54785 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Limk2O54785 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Limk2O54785 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Gm7153-201ENSMUST00000117092 455 ntBASIC16.8■□□□□ 0.28
Limk2O54785 Gm11336-201ENSMUST00000118168 334 ntBASIC16.8■□□□□ 0.28
Limk2O54785 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.8■□□□□ 0.28
Limk2O54785 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.8■□□□□ 0.28
Limk2O54785 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Limk2O54785 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.8■□□□□ 0.28
Limk2O54785 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Limk2O54785 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.8■□□□□ 0.28
Limk2O54785 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.8■□□□□ 0.28
Limk2O54785 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Limk2O54785 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Limk2O54785 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Limk2O54785 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Limk2O54785 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Gm7461-201ENSMUST00000058918 827 ntBASIC16.79■□□□□ 0.28
Limk2O54785 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Limk2O54785 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms