Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx4O35137 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Alx4O35137 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Alx4O35137 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Alx4O35137 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.81□□□□□ -0.04
Alx4O35137 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.81□□□□□ -0.04
Alx4O35137 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx4O35137 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Alx4O35137 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Alx4O35137 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Alx4O35137 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Gm20049-201ENSMUST00000219950 730 ntBASIC14.8□□□□□ -0.04
Alx4O35137 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.8□□□□□ -0.04
Alx4O35137 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Alx4O35137 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Alx4O35137 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Alx4O35137 Gm7638-201ENSMUST00000121348 967 ntBASIC14.79□□□□□ -0.04
Alx4O35137 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Alx4O35137 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.79□□□□□ -0.04
Alx4O35137 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.79□□□□□ -0.04
Alx4O35137 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Alx4O35137 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Alx4O35137 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Alx4O35137 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.78□□□□□ -0.04
Alx4O35137 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.78□□□□□ -0.04
Alx4O35137 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Alx4O35137 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Alx4O35137 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.78□□□□□ -0.04
Alx4O35137 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.78□□□□□ -0.04
Alx4O35137 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.78□□□□□ -0.04
Alx4O35137 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.78□□□□□ -0.04
Alx4O35137 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Alx4O35137 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx4O35137 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.77□□□□□ -0.04
Alx4O35137 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Alx4O35137 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Alx4O35137 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx4O35137 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx4O35137 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Alx4O35137 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Alx4O35137 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms