Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm43575-201ENSMUST00000196420 516 ntBASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
B020004C17RikJ3QP07 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Gm7222-201ENSMUST00000117512 906 ntBASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
B020004C17RikJ3QP07 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
B020004C17RikJ3QP07 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
B020004C17RikJ3QP07 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
B020004C17RikJ3QP07 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms