Protein–RNA interactions for Protein: G5E870

Trip12, E3 ubiquitin-protein ligase TRIP12, mousemouse

Known RBP Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trip12G5E870 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trip12G5E870 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trip12G5E870 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trip12G5E870 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.12■□□□□ 0.01
Trip12G5E870 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.12■□□□□ 0.01
Trip12G5E870 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trip12G5E870 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trip12G5E870 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trip12G5E870 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Gm8969-201ENSMUST00000199694 526 ntBASIC15.12■□□□□ 0.01
Trip12G5E870 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.12■□□□□ 0.01
Trip12G5E870 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.12■□□□□ 0.01
Trip12G5E870 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.12■□□□□ 0.01
Trip12G5E870 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trip12G5E870 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trip12G5E870 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trip12G5E870 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.11■□□□□ 0.01
Trip12G5E870 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.11■□□□□ 0.01
Trip12G5E870 Gm7230-201ENSMUST00000173026 815 ntBASIC15.11■□□□□ 0.01
Trip12G5E870 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Psmb5-202ENSMUST00000227257 622 ntBASIC15.11■□□□□ 0.01
Trip12G5E870 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trip12G5E870 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.11■□□□□ 0.01
Trip12G5E870 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.1■□□□□ 0.01
Trip12G5E870 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.1■□□□□ 0.01
Trip12G5E870 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trip12G5E870 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trip12G5E870 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Gm25745-201ENSMUST00000174945 133 ntBASIC15.1■□□□□ 0.01
Trip12G5E870 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trip12G5E870 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trip12G5E870 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trip12G5E870 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.1■□□□□ 0.01
Trip12G5E870 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.09■□□□□ 0.01
Trip12G5E870 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.09■□□□□ 0.01
Trip12G5E870 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.09■□□□□ 0.01
Trip12G5E870 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.09■□□□□ 0.01
Trip12G5E870 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Gm7862-201ENSMUST00000121461 292 ntBASIC15.09■□□□□ 0.01
Trip12G5E870 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trip12G5E870 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.09■□□□□ 0.01
Trip12G5E870 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trip12G5E870 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trip12G5E870 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms