Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NpcdF8VQB8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NpcdF8VQB8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NpcdF8VQB8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.91■□□□□ 0.78
NpcdF8VQB8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
NpcdF8VQB8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NpcdF8VQB8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.9■□□□□ 0.78
NpcdF8VQB8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NpcdF8VQB8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NpcdF8VQB8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.89■□□□□ 0.78
NpcdF8VQB8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Gm13418-201ENSMUST00000119097 944 ntBASIC19.89■□□□□ 0.77
NpcdF8VQB8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Gm18421-201ENSMUST00000204122 625 ntBASIC19.89■□□□□ 0.77
NpcdF8VQB8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.89■□□□□ 0.77
NpcdF8VQB8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NpcdF8VQB8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Gm15173-201ENSMUST00000122049 433 ntBASIC19.88■□□□□ 0.77
NpcdF8VQB8 Gm44430-201ENSMUST00000203376 995 ntBASIC19.88■□□□□ 0.77
NpcdF8VQB8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms