Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Gm43474-201ENSMUST00000196415 774 ntBASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.74■□□□□ 0.27
Ccdc188F6WEU2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Gm15653-201ENSMUST00000119247 907 ntBASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Gm2423-201ENSMUST00000074863 733 ntBASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc188F6WEU2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Gm13597-201ENSMUST00000121239 375 ntBASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc188F6WEU2 BC021767-201ENSMUST00000126387 1716 ntBASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc188F6WEU2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc188F6WEU2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc188F6WEU2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms