Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28305F6U473 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28305F6U473 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Gm28305F6U473 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28305F6U473 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28305F6U473 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28305F6U473 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28305F6U473 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Gm28305F6U473 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm28305F6U473 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm28305F6U473 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Gm28305F6U473 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.27□□□□□ -0.45
Gm28305F6U473 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.27□□□□□ -0.45
Gm28305F6U473 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.27□□□□□ -0.45
Gm28305F6U473 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.27□□□□□ -0.45
Gm28305F6U473 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm28305F6U473 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm28305F6U473 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.26□□□□□ -0.45
Gm28305F6U473 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm28305F6U473 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28305F6U473 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Gm28305F6U473 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28305F6U473 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28305F6U473 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28305F6U473 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28305F6U473 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28305F6U473 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28305F6U473 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms