Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Srp54bE9PXC0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Gm15372-201ENSMUST00000120729 834 ntBASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Gm10052-201ENSMUST00000168019 960 ntBASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Mzt1-203ENSMUST00000227948 952 ntBASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Gm7729-201ENSMUST00000050143 801 ntBASIC16.29■□□□□ 0.2
Srp54bE9PXC0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Srp54bE9PXC0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Gm5864-201ENSMUST00000202263 970 ntBASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.28■□□□□ 0.2
Srp54bE9PXC0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Rprl3-201ENSMUST00000157400 290 ntBASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.27■□□□□ 0.2
Srp54bE9PXC0 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Srp54bE9PXC0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Srp54bE9PXC0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Srp54bE9PXC0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Srp54bE9PXC0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Srp54bE9PXC0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.27■□□□□ 0.19
Srp54bE9PXC0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Gm13312-201ENSMUST00000119631 718 ntBASIC16.26■□□□□ 0.19
Srp54bE9PXC0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Mir8098-201ENSMUST00000184011 137 ntBASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Gm44771-201ENSMUST00000206975 626 ntBASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Srp54bE9PXC0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms