Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Hfm1D3Z4R1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Gm7229-201ENSMUST00000214719 1007 ntBASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hfm1D3Z4R1 Gm16499-203ENSMUST00000204633 2177 ntBASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Gm5253-201ENSMUST00000187104 1025 ntBASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hfm1D3Z4R1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
Hfm1D3Z4R1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hfm1D3Z4R1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hfm1D3Z4R1 Mir6404-201ENSMUST00000183699 94 ntBASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hfm1D3Z4R1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hfm1D3Z4R1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 AC158982.1-201ENSMUST00000228377 901 ntBASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Gm43182-201ENSMUST00000199476 2528 ntBASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC23.16■■□□□ 1.3
Hfm1D3Z4R1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms