Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.41■□□□□ 0.7
Usp42B2RQC2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp42B2RQC2 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.4■□□□□ 0.7
Usp42B2RQC2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Gm25016-201ENSMUST00000158399 131 ntBASIC19.4■□□□□ 0.7
Usp42B2RQC2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp42B2RQC2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.39■□□□□ 0.7
Usp42B2RQC2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp42B2RQC2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Gm29518-201ENSMUST00000190858 372 ntBASIC19.38■□□□□ 0.69
Usp42B2RQC2 Gm7977-201ENSMUST00000193787 748 ntBASIC19.38■□□□□ 0.69
Usp42B2RQC2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp42B2RQC2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Usp42B2RQC2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp42B2RQC2 Gm6623-201ENSMUST00000173570 544 ntBASIC19.36■□□□□ 0.69
Usp42B2RQC2 Gm17808-201ENSMUST00000200859 894 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms