Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Gm11764-201ENSMUST00000120221 623 ntBASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a6B1AVK5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a6B1AVK5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a6B1AVK5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a6B1AVK5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a6B1AVK5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Gm8655-201ENSMUST00000221159 852 ntBASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a6B1AVK5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a6B1AVK5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col4a6B1AVK5 Gm15743-202ENSMUST00000182690 1901 ntBASIC17■□□□□ 0.31
Col4a6B1AVK5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a6B1AVK5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col4a6B1AVK5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a6B1AVK5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17■□□□□ 0.31
Col4a6B1AVK5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col4a6B1AVK5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col4a6B1AVK5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a6B1AVK5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col4a6B1AVK5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a6B1AVK5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a6B1AVK5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.98■□□□□ 0.31
Col4a6B1AVK5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a6B1AVK5 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Auts2-212ENSMUST00000178555 309 ntBASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a6B1AVK5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms