Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Gm14822-201ENSMUST00000122247 291 ntBASIC13.95□□□□□ -0.18
Col6a4A2AX52 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Mir8112-201ENSMUST00000184382 131 ntBASIC13.95□□□□□ -0.18
Col6a4A2AX52 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Col6a4A2AX52 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.95□□□□□ -0.18
Col6a4A2AX52 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a4A2AX52 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.94□□□□□ -0.18
Col6a4A2AX52 Gm15165-201ENSMUST00000118140 502 ntBASIC13.94□□□□□ -0.18
Col6a4A2AX52 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Gm9727-201ENSMUST00000161387 555 ntBASIC13.94□□□□□ -0.18
Col6a4A2AX52 Gm44450-201ENSMUST00000199528 114 ntBASIC13.94□□□□□ -0.18
Col6a4A2AX52 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Grk6-207ENSMUST00000225925 2769 ntBASIC13.94□□□□□ -0.18
Col6a4A2AX52 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.94□□□□□ -0.18
Col6a4A2AX52 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.94□□□□□ -0.18
Col6a4A2AX52 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col6a4A2AX52 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a4A2AX52 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a4A2AX52 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms