Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm11620-201ENSMUST00000118770 1845 ntBASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv1-88A0A140T8N1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm15375-201ENSMUST00000119510 849 ntBASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm42918-201ENSMUST00000199249 1580 ntBASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv1-88A0A140T8N1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms