Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Gm10418-201ENSMUST00000100943 576 ntBASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhgb8A0A140LI48 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhgb8A0A140LI48 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhgb8A0A140LI48 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm13836-201ENSMUST00000121159 501 ntBASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 AC135963.1-201ENSMUST00000211640 717 ntBASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 AC158538.1-201ENSMUST00000225870 294 ntBASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm7712-202ENSMUST00000222331 1510 ntBASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm15565-201ENSMUST00000118890 427 ntBASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm5417-201ENSMUST00000079706 384 ntBASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhgb8A0A140LI48 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms