Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcmt1A0A0U1RNF2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcmt1A0A0U1RNF2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lcmt1A0A0U1RNF2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcmt1A0A0U1RNF2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcmt1A0A0U1RNF2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms