Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv16A0A0B4J1H3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv16A0A0B4J1H3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm7638-201ENSMUST00000121348 967 ntBASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trbv16A0A0B4J1H3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv16A0A0B4J1H3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm37856-201ENSMUST00000191634 999 ntBASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm38027-201ENSMUST00000192315 235 ntBASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 AC164629.5-201ENSMUST00000220387 632 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms