Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Gm6576-201ENSMUST00000169678 883 ntBASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Gm44549-201ENSMUST00000208351 577 ntBASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-5A0A075B6B5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Prob1-201ENSMUST00000097619 3021 ntBASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Gm7514-201ENSMUST00000209475 934 ntBASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trav6-5A0A075B6B5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-5A0A075B6B5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-5A0A075B6B5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms