Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-7A0A075B6B0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Mir2861-201ENSMUST00000175539 82 ntBASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-7A0A075B6B0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6d-7A0A075B6B0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6d-7A0A075B6B0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.83□□□□□ -0.35
Trav6d-7A0A075B6B0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm6433-201ENSMUST00000118634 875 ntBASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6d-7A0A075B6B0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms