Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7-6A0A075B640 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7-6A0A075B640 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Gm18025-201ENSMUST00000221733 862 ntBASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7-6A0A075B640 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms